cellflow.datasets.pbmc_cytokines

cellflow.datasets.pbmc_cytokines(force_download=False, **kwargs)[source]

PBMC samples from 12 donors treated with 90 cytokines.

Processed data from https://www.parsebiosciences.com/datasets/10-million-human-pbmcs-in-a-single-experiment/, subset to 2000 highly varibale genes, containing embeddings for donors and cytokines.

Parameters:

  • force_download (bool) – Whether to force-download the data.

  • kwargs (Any) – Keyword arguments for anndata.read_h5ad().

Return type:

AnnData

Returns:

: Annotated data object.